Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox6P40645 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12□□□□□ -0.49
Sox6P40645 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12□□□□□ -0.49
Sox6P40645 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12□□□□□ -0.49
Sox6P40645 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12□□□□□ -0.49
Sox6P40645 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12□□□□□ -0.49
Sox6P40645 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
Sox6P40645 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sox6P40645 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Sox6P40645 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sox6P40645 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox6P40645 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox6P40645 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.99□□□□□ -0.49
Sox6P40645 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.99□□□□□ -0.49
Sox6P40645 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.99□□□□□ -0.49
Sox6P40645 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox6P40645 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Gm29608-201ENSMUST00000190444 463 ntBASIC11.99□□□□□ -0.49
Sox6P40645 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.99□□□□□ -0.49
Sox6P40645 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.99□□□□□ -0.49
Sox6P40645 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox6P40645 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox6P40645 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Sox6P40645 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.99□□□□□ -0.49
Sox6P40645 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.99□□□□□ -0.49
Sox6P40645 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox6P40645 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox6P40645 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Sox6P40645 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sox6P40645 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox6P40645 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.98□□□□□ -0.49
Sox6P40645 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sox6P40645 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sox6P40645 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Gm12490-201ENSMUST00000120255 560 ntBASIC11.98□□□□□ -0.49
Sox6P40645 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.98□□□□□ -0.49
Sox6P40645 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Sox6P40645 Gm45384-201ENSMUST00000210451 277 ntBASIC11.98□□□□□ -0.49
Sox6P40645 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.98□□□□□ -0.49
Sox6P40645 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.98□□□□□ -0.49
Sox6P40645 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.98□□□□□ -0.49
Sox6P40645 Gm26315-201ENSMUST00000083890 321 ntBASIC11.98□□□□□ -0.49
Sox6P40645 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox6P40645 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox6P40645 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sox6P40645 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox6P40645 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms