Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TfamP40630 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
TfamP40630 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TfamP40630 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TfamP40630 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TfamP40630 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TfamP40630 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.35□□□□□ -0.43
TfamP40630 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TfamP40630 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TfamP40630 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TfamP40630 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.35□□□□□ -0.43
TfamP40630 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TfamP40630 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.34□□□□□ -0.43
TfamP40630 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.34□□□□□ -0.43
TfamP40630 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.34□□□□□ -0.43
TfamP40630 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
TfamP40630 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.34□□□□□ -0.43
TfamP40630 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TfamP40630 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.34□□□□□ -0.43
TfamP40630 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.34□□□□□ -0.43
TfamP40630 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TfamP40630 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.34□□□□□ -0.43
TfamP40630 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
TfamP40630 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.34□□□□□ -0.43
TfamP40630 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.34□□□□□ -0.43
TfamP40630 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TfamP40630 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TfamP40630 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TfamP40630 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
TfamP40630 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
TfamP40630 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TfamP40630 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TfamP40630 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TfamP40630 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.33□□□□□ -0.43
TfamP40630 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TfamP40630 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.33□□□□□ -0.44
TfamP40630 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TfamP40630 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.33□□□□□ -0.44
TfamP40630 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TfamP40630 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TfamP40630 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TfamP40630 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Gm8805-201ENSMUST00000117848 313 ntBASIC12.33□□□□□ -0.44
TfamP40630 Gm23984-201ENSMUST00000157139 203 ntBASIC12.33□□□□□ -0.44
TfamP40630 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.33□□□□□ -0.44
TfamP40630 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.33□□□□□ -0.44
TfamP40630 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.33□□□□□ -0.44
TfamP40630 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.33□□□□□ -0.44
TfamP40630 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.33□□□□□ -0.44
TfamP40630 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.33□□□□□ -0.44
TfamP40630 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TfamP40630 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TfamP40630 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms