Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Gm23085-201ENSMUST00000157849 293 ntBASIC13.07□□□□□ -0.32
Cxcl12P40224 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Gm10774-201ENSMUST00000188689 204 ntBASIC13.07□□□□□ -0.32
Cxcl12P40224 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.07□□□□□ -0.32
Cxcl12P40224 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.07□□□□□ -0.32
Cxcl12P40224 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Gm43962-201ENSMUST00000203898 190 ntBASIC13.07□□□□□ -0.32
Cxcl12P40224 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.07□□□□□ -0.32
Cxcl12P40224 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.07□□□□□ -0.32
Cxcl12P40224 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cxcl12P40224 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cxcl12P40224 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cxcl12P40224 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.06□□□□□ -0.32
Cxcl12P40224 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cxcl12P40224 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cxcl12P40224 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cxcl12P40224 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.06□□□□□ -0.32
Cxcl12P40224 Gm15573-201ENSMUST00000119487 540 ntBASIC13.06□□□□□ -0.32
Cxcl12P40224 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.06□□□□□ -0.32
Cxcl12P40224 Rmrp-201ENSMUST00000157463 271 ntBASIC13.06□□□□□ -0.32
Cxcl12P40224 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cxcl12P40224 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cxcl12P40224 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.06□□□□□ -0.32
Cxcl12P40224 Mir7686-201ENSMUST00000200604 57 ntBASIC13.06□□□□□ -0.32
Cxcl12P40224 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Cxcl12P40224 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.06□□□□□ -0.32
Cxcl12P40224 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.06□□□□□ -0.32
Cxcl12P40224 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.06□□□□□ -0.32
Cxcl12P40224 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.06□□□□□ -0.32
Cxcl12P40224 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cxcl12P40224 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
Cxcl12P40224 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl12P40224 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cxcl12P40224 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Cxcl12P40224 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.05□□□□□ -0.32
Cxcl12P40224 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.05□□□□□ -0.32
Cxcl12P40224 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Cxcl12P40224 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cxcl12P40224 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.05□□□□□ -0.32
Cxcl12P40224 Gm42937-201ENSMUST00000197360 752 ntBASIC13.05□□□□□ -0.32
Cxcl12P40224 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.05□□□□□ -0.32
Cxcl12P40224 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.05□□□□□ -0.32
Cxcl12P40224 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.05□□□□□ -0.32
Cxcl12P40224 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms