Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.49□□□□□ -0.73
Timp3P39876 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.49□□□□□ -0.73
Timp3P39876 Gm7029-201ENSMUST00000173226 450 ntBASIC10.49□□□□□ -0.73
Timp3P39876 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.49□□□□□ -0.73
Timp3P39876 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Timp3P39876 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.49□□□□□ -0.73
Timp3P39876 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.49□□□□□ -0.73
Timp3P39876 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.49□□□□□ -0.73
Timp3P39876 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Timp3P39876 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.49□□□□□ -0.73
Timp3P39876 Olfr582-201ENSMUST00000098212 960 ntBASIC10.49□□□□□ -0.73
Timp3P39876 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Timp3P39876 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Timp3P39876 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Timp3P39876 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.48□□□□□ -0.73
Timp3P39876 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Timp3P39876 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.48□□□□□ -0.73
Timp3P39876 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Gm4768-201ENSMUST00000206199 686 ntBASIC10.48□□□□□ -0.73
Timp3P39876 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.48□□□□□ -0.73
Timp3P39876 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Timp3P39876 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.48□□□□□ -0.73
Timp3P39876 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.48□□□□□ -0.73
Timp3P39876 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.48□□□□□ -0.73
Timp3P39876 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.48□□□□□ -0.73
Timp3P39876 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.48□□□□□ -0.73
Timp3P39876 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Timp3P39876 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Timp3P39876 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Timp3P39876 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.47□□□□□ -0.73
Timp3P39876 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.47□□□□□ -0.73
Timp3P39876 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Timp3P39876 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms