Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.85□□□□□ -0.35
Fen1P39749 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Fen1P39749 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.85□□□□□ -0.35
Fen1P39749 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.85□□□□□ -0.35
Fen1P39749 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.85□□□□□ -0.35
Fen1P39749 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Gm9522-201ENSMUST00000182394 926 ntBASIC12.85□□□□□ -0.35
Fen1P39749 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Fen1P39749 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.85□□□□□ -0.35
Fen1P39749 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.85□□□□□ -0.35
Fen1P39749 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.85□□□□□ -0.35
Fen1P39749 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.85□□□□□ -0.35
Fen1P39749 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.85□□□□□ -0.35
Fen1P39749 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Gm2423-201ENSMUST00000074863 733 ntBASIC12.85□□□□□ -0.35
Fen1P39749 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Fen1P39749 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.85□□□□□ -0.35
Fen1P39749 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.85□□□□□ -0.35
Fen1P39749 Cog3-203ENSMUST00000227473 4197 ntBASIC12.85□□□□□ -0.35
Fen1P39749 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fen1P39749 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.85□□□□□ -0.35
Fen1P39749 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Fen1P39749 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.84□□□□□ -0.35
Fen1P39749 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.84□□□□□ -0.35
Fen1P39749 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.84□□□□□ -0.35
Fen1P39749 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.84□□□□□ -0.35
Fen1P39749 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Fen1P39749 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Fen1P39749 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fen1P39749 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Fen1P39749 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Fen1P39749 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Fen1P39749 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.83□□□□□ -0.36
Fen1P39749 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Fen1P39749 Gm15376-201ENSMUST00000122258 783 ntBASIC12.83□□□□□ -0.36
Fen1P39749 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.83□□□□□ -0.36
Fen1P39749 Gm16215-201ENSMUST00000161990 637 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms