Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.57□□□□□ -0.4
HmgclP38060 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Gm9396-201ENSMUST00000076703 567 ntBASIC12.57□□□□□ -0.4
HmgclP38060 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.57□□□□□ -0.4
HmgclP38060 Gm26035-201ENSMUST00000083065 308 ntBASIC12.57□□□□□ -0.4
HmgclP38060 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HmgclP38060 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
HmgclP38060 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.57□□□□□ -0.4
HmgclP38060 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.57□□□□□ -0.4
HmgclP38060 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.56□□□□□ -0.4
HmgclP38060 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.56□□□□□ -0.4
HmgclP38060 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
HmgclP38060 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HmgclP38060 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.56□□□□□ -0.4
HmgclP38060 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HmgclP38060 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.56□□□□□ -0.4
HmgclP38060 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.56□□□□□ -0.4
HmgclP38060 Gm13492-201ENSMUST00000119772 665 ntBASIC12.56□□□□□ -0.4
HmgclP38060 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.56□□□□□ -0.4
HmgclP38060 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HmgclP38060 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.56□□□□□ -0.4
HmgclP38060 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.56□□□□□ -0.4
HmgclP38060 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.56□□□□□ -0.4
HmgclP38060 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
HmgclP38060 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.56□□□□□ -0.4
HmgclP38060 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
HmgclP38060 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HmgclP38060 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.56□□□□□ -0.4
HmgclP38060 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HmgclP38060 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HmgclP38060 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HmgclP38060 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HmgclP38060 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HmgclP38060 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.55□□□□□ -0.4
HmgclP38060 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HmgclP38060 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HmgclP38060 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HmgclP38060 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HmgclP38060 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HmgclP38060 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HmgclP38060 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HmgclP38060 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HmgclP38060 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HmgclP38060 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HmgclP38060 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HmgclP38060 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.55□□□□□ -0.4
HmgclP38060 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.55□□□□□ -0.4
HmgclP38060 Gm16379-201ENSMUST00000161469 348 ntBASIC12.55□□□□□ -0.4
HmgclP38060 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HmgclP38060 Gm6222-202ENSMUST00000182143 629 ntBASIC12.55□□□□□ -0.4
HmgclP38060 Gm8762-201ENSMUST00000193486 339 ntBASIC12.55□□□□□ -0.4
HmgclP38060 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.55□□□□□ -0.4
HmgclP38060 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.55□□□□□ -0.4
HmgclP38060 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.55□□□□□ -0.4
HmgclP38060 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.55□□□□□ -0.4
HmgclP38060 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HmgclP38060 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HmgclP38060 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms