Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxc11P31313 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.39□□□□□ -0.43
Hoxc11P31313 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc11P31313 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc11P31313 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc11P31313 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc11P31313 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.39□□□□□ -0.43
Hoxc11P31313 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc11P31313 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxc11P31313 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc11P31313 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxc11P31313 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc11P31313 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Gm13297-201ENSMUST00000120205 934 ntBASIC12.38□□□□□ -0.43
Hoxc11P31313 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.38□□□□□ -0.43
Hoxc11P31313 Gm45865-201ENSMUST00000211815 945 ntBASIC12.38□□□□□ -0.43
Hoxc11P31313 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxc11P31313 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc11P31313 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.37□□□□□ -0.43
Hoxc11P31313 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.37□□□□□ -0.43
Hoxc11P31313 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Gm4986-201ENSMUST00000119731 549 ntBASIC12.37□□□□□ -0.43
Hoxc11P31313 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Gm37489-201ENSMUST00000191883 159 ntBASIC12.37□□□□□ -0.43
Hoxc11P31313 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Gm10608-202ENSMUST00000213924 676 ntBASIC12.37□□□□□ -0.43
Hoxc11P31313 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxc11P31313 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hoxc11P31313 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hoxc11P31313 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hoxc11P31313 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxc11P31313 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Hoxc11P31313 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc11P31313 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Hoxc11P31313 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc11P31313 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms