Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.6□□□□□ -0.07
Vcam1P29533 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.6□□□□□ -0.07
Vcam1P29533 Gm23119-201ENSMUST00000158610 140 ntBASIC14.6□□□□□ -0.07
Vcam1P29533 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.6□□□□□ -0.07
Vcam1P29533 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.6□□□□□ -0.07
Vcam1P29533 Nsd1-205ENSMUST00000224693 852 ntBASIC14.6□□□□□ -0.07
Vcam1P29533 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.6□□□□□ -0.07
Vcam1P29533 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vcam1P29533 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.6□□□□□ -0.07
Vcam1P29533 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcam1P29533 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.59□□□□□ -0.07
Vcam1P29533 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.59□□□□□ -0.07
Vcam1P29533 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vcam1P29533 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Vcam1P29533 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.59□□□□□ -0.07
Vcam1P29533 Gm12566-201ENSMUST00000121479 359 ntBASIC14.59□□□□□ -0.07
Vcam1P29533 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.59□□□□□ -0.07
Vcam1P29533 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.59□□□□□ -0.07
Vcam1P29533 Gm17812-201ENSMUST00000204935 318 ntBASIC14.59□□□□□ -0.07
Vcam1P29533 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.59□□□□□ -0.07
Vcam1P29533 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.59□□□□□ -0.07
Vcam1P29533 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Vcam1P29533 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.59□□□□□ -0.07
Vcam1P29533 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.59□□□□□ -0.07
Vcam1P29533 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Vcam1P29533 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Vcam1P29533 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcam1P29533 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Vcam1P29533 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Vcam1P29533 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Vcam1P29533 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.58□□□□□ -0.07
Vcam1P29533 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.58□□□□□ -0.07
Vcam1P29533 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vcam1P29533 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.58□□□□□ -0.07
Vcam1P29533 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Vcam1P29533 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.58□□□□□ -0.08
Vcam1P29533 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.58□□□□□ -0.08
Vcam1P29533 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.58□□□□□ -0.08
Vcam1P29533 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.58□□□□□ -0.08
Vcam1P29533 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.58□□□□□ -0.08
Vcam1P29533 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.58□□□□□ -0.08
Vcam1P29533 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Gm27552-201ENSMUST00000183351 62 ntBASIC14.58□□□□□ -0.08
Vcam1P29533 Gm27844-201ENSMUST00000183613 62 ntBASIC14.58□□□□□ -0.08
Vcam1P29533 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.58□□□□□ -0.08
Vcam1P29533 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.58□□□□□ -0.08
Vcam1P29533 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.58□□□□□ -0.08
Vcam1P29533 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.58□□□□□ -0.08
Vcam1P29533 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.58□□□□□ -0.08
Vcam1P29533 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.58□□□□□ -0.08
Vcam1P29533 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.58□□□□□ -0.08
Vcam1P29533 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Vcam1P29533 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms