Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Clk1P22518 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.98□□□□□ -0.49
Clk1P22518 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.98□□□□□ -0.49
Clk1P22518 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Matn2-203ENSMUST00000226766 3252 ntBASIC11.98□□□□□ -0.49
Clk1P22518 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.98□□□□□ -0.49
Clk1P22518 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Clk1P22518 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.97□□□□□ -0.49
Clk1P22518 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.97□□□□□ -0.49
Clk1P22518 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Clk1P22518 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Clk1P22518 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.97□□□□□ -0.49
Clk1P22518 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Clk1P22518 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Clk1P22518 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Clk1P22518 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Gm12490-201ENSMUST00000120255 560 ntBASIC11.97□□□□□ -0.49
Clk1P22518 Gm27892-201ENSMUST00000185017 106 ntBASIC11.97□□□□□ -0.49
Clk1P22518 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.97□□□□□ -0.49
Clk1P22518 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.97□□□□□ -0.49
Clk1P22518 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.97□□□□□ -0.49
Clk1P22518 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Clk1P22518 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Clk1P22518 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Clk1P22518 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.97□□□□□ -0.49
Clk1P22518 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Clk1P22518 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clk1P22518 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.97□□□□□ -0.49
Clk1P22518 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.96□□□□□ -0.49
Clk1P22518 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.96□□□□□ -0.49
Clk1P22518 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Gm38671-201ENSMUST00000200573 130 ntBASIC11.96□□□□□ -0.49
Clk1P22518 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.96□□□□□ -0.49
Clk1P22518 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Clk1P22518 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.96□□□□□ -0.49
Clk1P22518 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clk1P22518 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clk1P22518 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clk1P22518 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clk1P22518 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clk1P22518 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clk1P22518 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clk1P22518 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clk1P22518 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.96□□□□□ -0.5
Clk1P22518 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clk1P22518 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clk1P22518 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms