Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Gm8712-201ENSMUST00000221090 701 ntBASIC16.3■□□□□ 0.2
Prim1P20664 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prim1P20664 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prim1P20664 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prim1P20664 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prim1P20664 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prim1P20664 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Prim1P20664 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prim1P20664 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prim1P20664 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.3■□□□□ 0.2
Prim1P20664 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prim1P20664 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.3■□□□□ 0.2
Prim1P20664 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prim1P20664 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.3■□□□□ 0.2
Prim1P20664 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.29■□□□□ 0.2
Prim1P20664 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Prim1P20664 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.29■□□□□ 0.2
Prim1P20664 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.29■□□□□ 0.2
Prim1P20664 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Prim1P20664 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.29■□□□□ 0.2
Prim1P20664 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.29■□□□□ 0.2
Prim1P20664 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC16.29■□□□□ 0.2
Prim1P20664 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Gm29199-201ENSMUST00000187766 775 ntBASIC16.29■□□□□ 0.2
Prim1P20664 Gm37709-201ENSMUST00000195074 600 ntBASIC16.29■□□□□ 0.2
Prim1P20664 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.29■□□□□ 0.2
Prim1P20664 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC16.29■□□□□ 0.2
Prim1P20664 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.29■□□□□ 0.2
Prim1P20664 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Prim1P20664 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.29■□□□□ 0.2
Prim1P20664 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prim1P20664 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC16.29■□□□□ 0.2
Prim1P20664 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Prim1P20664 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Prim1P20664 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Prim1P20664 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Prim1P20664 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Prim1P20664 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Prim1P20664 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.28■□□□□ 0.2
Prim1P20664 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.28■□□□□ 0.2
Prim1P20664 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Prim1P20664 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Prim1P20664 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.28■□□□□ 0.2
Prim1P20664 Gm24830-201ENSMUST00000102024 166 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Gm25890-201ENSMUST00000177643 165 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Gm22614-201ENSMUST00000178300 165 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.28■□□□□ 0.2
Prim1P20664 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.28■□□□□ 0.2
Prim1P20664 Gm44967-201ENSMUST00000207047 631 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Gm22042-201ENSMUST00000082989 165 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Gm26232-201ENSMUST00000083360 166 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Gm24136-201ENSMUST00000083374 165 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Gm26110-201ENSMUST00000083971 165 ntBASIC16.28■□□□□ 0.2
Prim1P20664 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Prim1P20664 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Prim1P20664 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.28■□□□□ 0.2
Prim1P20664 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Prim1P20664 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prim1P20664 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.28■□□□□ 0.2
Prim1P20664 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prim1P20664 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prim1P20664 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prim1P20664 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.27■□□□□ 0.2
Prim1P20664 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms