Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 Snora73a-201ENSMUST00000082453 205 ntBASIC12.2□□□□□ -0.46
Hoxb9P20615 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.2□□□□□ -0.46
Hoxb9P20615 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hoxb9P20615 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb9P20615 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hoxb9P20615 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxb9P20615 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb9P20615 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.19□□□□□ -0.46
Hoxb9P20615 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Gm25927-201ENSMUST00000175058 117 ntBASIC12.19□□□□□ -0.46
Hoxb9P20615 Gm27731-201ENSMUST00000185192 107 ntBASIC12.19□□□□□ -0.46
Hoxb9P20615 Gm45784-201ENSMUST00000188360 142 ntBASIC12.19□□□□□ -0.46
Hoxb9P20615 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.19□□□□□ -0.46
Hoxb9P20615 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.19□□□□□ -0.46
Hoxb9P20615 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxb9P20615 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb9P20615 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hoxb9P20615 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.18□□□□□ -0.46
Hoxb9P20615 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.18□□□□□ -0.46
Hoxb9P20615 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Gm23931-201ENSMUST00000103842 109 ntBASIC12.18□□□□□ -0.46
Hoxb9P20615 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.18□□□□□ -0.46
Hoxb9P20615 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxb9P20615 Gm13829-201ENSMUST00000119600 138 ntBASIC12.18□□□□□ -0.46
Hoxb9P20615 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.18□□□□□ -0.46
Hoxb9P20615 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Gm7809-201ENSMUST00000153199 742 ntBASIC12.18□□□□□ -0.46
Hoxb9P20615 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.18□□□□□ -0.46
Hoxb9P20615 Gm3890-201ENSMUST00000182416 207 ntBASIC12.18□□□□□ -0.46
Hoxb9P20615 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.18□□□□□ -0.46
Hoxb9P20615 Gm44124-201ENSMUST00000204159 472 ntBASIC12.18□□□□□ -0.46
Hoxb9P20615 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hoxb9P20615 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.18□□□□□ -0.46
Hoxb9P20615 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms