Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.25□□□□□ -0.45
Msx1P13297 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Msx1P13297 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Msx1P13297 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Msx1P13297 Gm24255-201ENSMUST00000104481 128 ntBASIC12.24□□□□□ -0.45
Msx1P13297 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.24□□□□□ -0.45
Msx1P13297 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.24□□□□□ -0.45
Msx1P13297 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.24□□□□□ -0.45
Msx1P13297 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.24□□□□□ -0.45
Msx1P13297 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.24□□□□□ -0.45
Msx1P13297 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.24□□□□□ -0.45
Msx1P13297 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Msx1P13297 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Msx1P13297 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.24□□□□□ -0.45
Msx1P13297 Gm43906-201ENSMUST00000203194 906 ntBASIC12.24□□□□□ -0.45
Msx1P13297 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.24□□□□□ -0.45
Msx1P13297 Gm5363-201ENSMUST00000211927 938 ntBASIC12.24□□□□□ -0.45
Msx1P13297 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.24□□□□□ -0.45
Msx1P13297 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.24□□□□□ -0.45
Msx1P13297 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.24□□□□□ -0.45
Msx1P13297 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Msx1P13297 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Msx1P13297 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Msx1P13297 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Msx1P13297 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.24□□□□□ -0.45
Msx1P13297 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx1P13297 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Msx1P13297 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Msx1P13297 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.23□□□□□ -0.45
Msx1P13297 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.23□□□□□ -0.45
Msx1P13297 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.23□□□□□ -0.45
Msx1P13297 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Gm6023-201ENSMUST00000118217 606 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Gm12997-201ENSMUST00000120207 640 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC12.23□□□□□ -0.45
Msx1P13297 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Gm17376-201ENSMUST00000166016 84 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.23□□□□□ -0.45
Msx1P13297 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.23□□□□□ -0.45
Msx1P13297 Gm20482-202ENSMUST00000174729 825 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Gm29011-201ENSMUST00000191059 712 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.23□□□□□ -0.45
Msx1P13297 Gm43138-201ENSMUST00000199123 708 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms