Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl3P10855 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.23□□□□□ -0.61
Ccl3P10855 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccl3P10855 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ccl3P10855 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.23□□□□□ -0.61
Ccl3P10855 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Gm14644-201ENSMUST00000116671 647 ntBASIC11.23□□□□□ -0.61
Ccl3P10855 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.23□□□□□ -0.61
Ccl3P10855 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.23□□□□□ -0.61
Ccl3P10855 Gm27627-201ENSMUST00000183644 150 ntBASIC11.23□□□□□ -0.61
Ccl3P10855 AU022133-201ENSMUST00000200601 873 ntBASIC11.23□□□□□ -0.61
Ccl3P10855 Gm7848-201ENSMUST00000210739 718 ntBASIC11.23□□□□□ -0.61
Ccl3P10855 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccl3P10855 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
Ccl3P10855 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ccl3P10855 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl3P10855 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.23□□□□□ -0.61
Ccl3P10855 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Ccl3P10855 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Ccl3P10855 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.22□□□□□ -0.61
Ccl3P10855 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccl3P10855 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.22□□□□□ -0.61
Ccl3P10855 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.22□□□□□ -0.61
Ccl3P10855 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.22□□□□□ -0.61
Ccl3P10855 Gm23699-201ENSMUST00000158835 135 ntBASIC11.22□□□□□ -0.61
Ccl3P10855 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Gm18734-201ENSMUST00000172937 808 ntBASIC11.22□□□□□ -0.61
Ccl3P10855 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.22□□□□□ -0.61
Ccl3P10855 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccl3P10855 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccl3P10855 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Ccl3P10855 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccl3P10855 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.22□□□□□ -0.61
Ccl3P10855 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.22□□□□□ -0.61
Ccl3P10855 Spcs1-203ENSMUST00000226374 592 ntBASIC11.22□□□□□ -0.61
Ccl3P10855 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Ccl3P10855 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ccl3P10855 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccl3P10855 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl3P10855 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.21□□□□□ -0.61
Ccl3P10855 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.21□□□□□ -0.61
Ccl3P10855 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms