Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC18.91■□□□□ 0.62
NclP09405 CT573034.1-201ENSMUST00000222983 313 ntBASIC18.91■□□□□ 0.62
NclP09405 CT485787.1-201ENSMUST00000225617 968 ntBASIC18.91■□□□□ 0.62
NclP09405 AC108416.1-202ENSMUST00000228927 1201 ntBASIC18.91■□□□□ 0.62
NclP09405 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC18.91■□□□□ 0.62
NclP09405 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NclP09405 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC18.9■□□□□ 0.62
NclP09405 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC18.9■□□□□ 0.62
NclP09405 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NclP09405 Gm23270-201ENSMUST00000104055 131 ntBASIC18.9■□□□□ 0.62
NclP09405 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC18.9■□□□□ 0.62
NclP09405 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Gm13813-201ENSMUST00000120998 787 ntBASIC18.9■□□□□ 0.62
NclP09405 Gm8908-201ENSMUST00000121633 1024 ntBASIC18.9■□□□□ 0.62
NclP09405 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
NclP09405 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC18.9■□□□□ 0.62
NclP09405 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC18.9■□□□□ 0.62
NclP09405 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC18.9■□□□□ 0.62
NclP09405 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC18.9■□□□□ 0.62
NclP09405 AC138604.1-201ENSMUST00000226969 739 ntBASIC18.9■□□□□ 0.62
NclP09405 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NclP09405 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NclP09405 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NclP09405 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC18.9■□□□□ 0.62
NclP09405 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NclP09405 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
NclP09405 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NclP09405 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
NclP09405 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
NclP09405 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
NclP09405 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NclP09405 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NclP09405 Gm13736-201ENSMUST00000119272 253 ntBASIC18.89■□□□□ 0.61
NclP09405 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC18.89■□□□□ 0.61
NclP09405 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC18.89■□□□□ 0.61
NclP09405 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC18.89■□□□□ 0.61
NclP09405 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC18.89■□□□□ 0.61
NclP09405 AC166095.1-201ENSMUST00000223731 1241 ntBASIC18.89■□□□□ 0.61
NclP09405 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC18.89■□□□□ 0.61
NclP09405 Gm8862-201ENSMUST00000198379 1346 ntBASIC18.89■□□□□ 0.61
NclP09405 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NclP09405 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NclP09405 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NclP09405 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NclP09405 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC18.89■□□□□ 0.61
NclP09405 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NclP09405 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NclP09405 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NclP09405 Gm44401-201ENSMUST00000204462 2375 ntBASIC18.89■□□□□ 0.61
NclP09405 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Gm24830-201ENSMUST00000102024 166 ntBASIC18.88■□□□□ 0.61
NclP09405 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NclP09405 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NclP09405 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC18.88■□□□□ 0.61
NclP09405 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC18.88■□□□□ 0.61
NclP09405 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Gm25890-201ENSMUST00000177643 165 ntBASIC18.88■□□□□ 0.61
NclP09405 Rnu1b2-201ENSMUST00000178073 165 ntBASIC18.88■□□□□ 0.61
NclP09405 Rnu1b1-201ENSMUST00000178250 165 ntBASIC18.88■□□□□ 0.61
NclP09405 Gm22614-201ENSMUST00000178300 165 ntBASIC18.88■□□□□ 0.61
NclP09405 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC18.88■□□□□ 0.61
NclP09405 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NclP09405 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Gm18615-201ENSMUST00000222919 1031 ntBASIC18.88■□□□□ 0.61
NclP09405 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Gm22042-201ENSMUST00000082989 165 ntBASIC18.88■□□□□ 0.61
NclP09405 Gm26232-201ENSMUST00000083360 166 ntBASIC18.88■□□□□ 0.61
NclP09405 Gm24136-201ENSMUST00000083374 165 ntBASIC18.88■□□□□ 0.61
NclP09405 Rnu1b6-201ENSMUST00000083839 166 ntBASIC18.88■□□□□ 0.61
NclP09405 Gm26110-201ENSMUST00000083971 165 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms