Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm13223-201ENSMUST00000118609 747 ntBASIC12.08□□□□□ -0.48
ApoeP08226 Gm38223-201ENSMUST00000194484 695 ntBASIC12.08□□□□□ -0.48
ApoeP08226 Gm2756-201ENSMUST00000195851 400 ntBASIC12.08□□□□□ -0.48
ApoeP08226 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Gm44771-201ENSMUST00000206975 626 ntBASIC12.08□□□□□ -0.48
ApoeP08226 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.08□□□□□ -0.48
ApoeP08226 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.08□□□□□ -0.48
ApoeP08226 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ApoeP08226 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.08□□□□□ -0.48
ApoeP08226 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
ApoeP08226 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.07□□□□□ -0.48
ApoeP08226 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.07□□□□□ -0.48
ApoeP08226 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.07□□□□□ -0.48
ApoeP08226 Gm12291-201ENSMUST00000121627 311 ntBASIC12.07□□□□□ -0.48
ApoeP08226 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.07□□□□□ -0.48
ApoeP08226 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.07□□□□□ -0.48
ApoeP08226 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.07□□□□□ -0.48
ApoeP08226 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.07□□□□□ -0.48
ApoeP08226 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.07□□□□□ -0.48
ApoeP08226 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.07□□□□□ -0.48
ApoeP08226 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.07□□□□□ -0.48
ApoeP08226 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ApoeP08226 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.07□□□□□ -0.48
ApoeP08226 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.07□□□□□ -0.48
ApoeP08226 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.07□□□□□ -0.48
ApoeP08226 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ApoeP08226 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.06□□□□□ -0.48
ApoeP08226 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ApoeP08226 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ApoeP08226 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Gm11594-201ENSMUST00000122313 162 ntBASIC12.06□□□□□ -0.48
ApoeP08226 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ApoeP08226 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.06□□□□□ -0.48
ApoeP08226 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ApoeP08226 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.06□□□□□ -0.48
ApoeP08226 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.06□□□□□ -0.48
ApoeP08226 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ApoeP08226 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ApoeP08226 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms