Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.51□□□□□ -0.25
TnfP06804 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Gm11930-201ENSMUST00000117788 190 ntBASIC13.51□□□□□ -0.25
TnfP06804 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.51□□□□□ -0.25
TnfP06804 Gm27023-201ENSMUST00000182372 285 ntBASIC13.51□□□□□ -0.25
TnfP06804 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TnfP06804 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.51□□□□□ -0.25
TnfP06804 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.51□□□□□ -0.25
TnfP06804 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TnfP06804 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TnfP06804 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
TnfP06804 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.5□□□□□ -0.25
TnfP06804 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.5□□□□□ -0.25
TnfP06804 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
TnfP06804 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TnfP06804 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TnfP06804 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.5□□□□□ -0.25
TnfP06804 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TnfP06804 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
TnfP06804 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Gm15236-201ENSMUST00000117309 379 ntBASIC13.5□□□□□ -0.25
TnfP06804 Gm15547-201ENSMUST00000122152 333 ntBASIC13.5□□□□□ -0.25
TnfP06804 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.5□□□□□ -0.25
TnfP06804 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.5□□□□□ -0.25
TnfP06804 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.5□□□□□ -0.25
TnfP06804 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.5□□□□□ -0.25
TnfP06804 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.5□□□□□ -0.25
TnfP06804 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
TnfP06804 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TnfP06804 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.49□□□□□ -0.25
TnfP06804 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.49□□□□□ -0.25
TnfP06804 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.49□□□□□ -0.25
TnfP06804 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.49□□□□□ -0.25
TnfP06804 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TnfP06804 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.49□□□□□ -0.25
TnfP06804 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Gm24830-201ENSMUST00000102024 166 ntBASIC13.49□□□□□ -0.25
TnfP06804 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.49□□□□□ -0.25
TnfP06804 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.49□□□□□ -0.25
TnfP06804 Gm25890-201ENSMUST00000177643 165 ntBASIC13.49□□□□□ -0.25
TnfP06804 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.49□□□□□ -0.25
TnfP06804 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.49□□□□□ -0.25
TnfP06804 Gm22614-201ENSMUST00000178300 165 ntBASIC13.49□□□□□ -0.25
TnfP06804 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms