Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.55□□□□□ -0.4
Hoxa4P06798 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Hoxa4P06798 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Hoxa4P06798 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.55□□□□□ -0.4
Hoxa4P06798 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxa4P06798 Gm12314-201ENSMUST00000118104 538 ntBASIC12.55□□□□□ -0.4
Hoxa4P06798 Gm13342-201ENSMUST00000121055 207 ntBASIC12.55□□□□□ -0.4
Hoxa4P06798 Gm14760-201ENSMUST00000121831 999 ntBASIC12.55□□□□□ -0.4
Hoxa4P06798 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.55□□□□□ -0.4
Hoxa4P06798 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.55□□□□□ -0.4
Hoxa4P06798 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.55□□□□□ -0.4
Hoxa4P06798 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.55□□□□□ -0.4
Hoxa4P06798 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.55□□□□□ -0.4
Hoxa4P06798 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.55□□□□□ -0.4
Hoxa4P06798 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa4P06798 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxa4P06798 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxa4P06798 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Gm24231-201ENSMUST00000104315 133 ntBASIC12.54□□□□□ -0.4
Hoxa4P06798 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Gm12241-201ENSMUST00000118330 726 ntBASIC12.54□□□□□ -0.4
Hoxa4P06798 Gm11222-201ENSMUST00000119005 738 ntBASIC12.54□□□□□ -0.4
Hoxa4P06798 Rmrp-201ENSMUST00000157463 271 ntBASIC12.54□□□□□ -0.4
Hoxa4P06798 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.54□□□□□ -0.4
Hoxa4P06798 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxa4P06798 Gm37489-201ENSMUST00000191883 159 ntBASIC12.54□□□□□ -0.4
Hoxa4P06798 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.54□□□□□ -0.4
Hoxa4P06798 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxa4P06798 Gm45331-201ENSMUST00000209868 554 ntBASIC12.54□□□□□ -0.4
Hoxa4P06798 Gm9368-201ENSMUST00000219348 831 ntBASIC12.54□□□□□ -0.4
Hoxa4P06798 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.54□□□□□ -0.4
Hoxa4P06798 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxa4P06798 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxa4P06798 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxa4P06798 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxa4P06798 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.54□□□□□ -0.4
Hoxa4P06798 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa4P06798 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.54□□□□□ -0.4
Hoxa4P06798 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa4P06798 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxa4P06798 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Hoxa4P06798 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxa4P06798 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa4P06798 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa4P06798 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxa4P06798 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa4P06798 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.53□□□□□ -0.4
Hoxa4P06798 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.53□□□□□ -0.4
Hoxa4P06798 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa4P06798 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa4P06798 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa4P06798 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa4P06798 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxa4P06798 Gm13315-201ENSMUST00000120376 991 ntBASIC12.53□□□□□ -0.4
Hoxa4P06798 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms