Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.38□□□□□ -0.59
P06344 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P06344 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.37□□□□□ -0.59
P06344 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
P06344 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.37□□□□□ -0.59
P06344 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Gm12291-201ENSMUST00000121627 311 ntBASIC11.37□□□□□ -0.59
P06344 Gm24548-201ENSMUST00000158650 108 ntBASIC11.37□□□□□ -0.59
P06344 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.37□□□□□ -0.59
P06344 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.37□□□□□ -0.59
P06344 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
P06344 Gm38158-201ENSMUST00000194617 339 ntBASIC11.37□□□□□ -0.59
P06344 Olfr284-202ENSMUST00000206647 966 ntBASIC11.37□□□□□ -0.59
P06344 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.37□□□□□ -0.59
P06344 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.37□□□□□ -0.59
P06344 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.37□□□□□ -0.59
P06344 Gm45930-201ENSMUST00000221330 292 ntBASIC11.37□□□□□ -0.59
P06344 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
P06344 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
P06344 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
P06344 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
P06344 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P06344 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
P06344 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.36□□□□□ -0.59
P06344 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
P06344 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
P06344 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
P06344 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.36□□□□□ -0.59
P06344 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.36□□□□□ -0.59
P06344 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
P06344 Gm8738-201ENSMUST00000172606 329 ntBASIC11.36□□□□□ -0.59
P06344 Gm23363-201ENSMUST00000175024 79 ntBASIC11.36□□□□□ -0.59
P06344 Gm27516-201ENSMUST00000184237 98 ntBASIC11.36□□□□□ -0.59
P06344 Mir8109-201ENSMUST00000184375 117 ntBASIC11.36□□□□□ -0.59
P06344 Mir6420-201ENSMUST00000185032 102 ntBASIC11.36□□□□□ -0.59
P06344 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.36□□□□□ -0.59
P06344 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.36□□□□□ -0.59
P06344 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.36□□□□□ -0.59
P06344 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
P06344 Olfr582-201ENSMUST00000098212 960 ntBASIC11.36□□□□□ -0.59
P06344 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.36□□□□□ -0.59
P06344 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
P06344 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
P06344 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.36□□□□□ -0.59
P06344 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.36□□□□□ -0.59
P06344 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P06344 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms