Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
P04224 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.22□□□□□ -0.61
P04224 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
P04224 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
P04224 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.21□□□□□ -0.61
P04224 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.21□□□□□ -0.61
P04224 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.21□□□□□ -0.61
P04224 Gm25144-201ENSMUST00000179561 110 ntBASIC11.21□□□□□ -0.61
P04224 Gm25352-201ENSMUST00000179815 110 ntBASIC11.21□□□□□ -0.61
P04224 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.21□□□□□ -0.61
P04224 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
P04224 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.21□□□□□ -0.61
P04224 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.21□□□□□ -0.61
P04224 Chchd1-203ENSMUST00000224633 557 ntBASIC11.21□□□□□ -0.61
P04224 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04224 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
P04224 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
P04224 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
P04224 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
P04224 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
P04224 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
P04224 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
P04224 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.2□□□□□ -0.62
P04224 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.2□□□□□ -0.62
P04224 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.2□□□□□ -0.62
P04224 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
P04224 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.2□□□□□ -0.62
P04224 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
P04224 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
P04224 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.2□□□□□ -0.62
P04224 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.2□□□□□ -0.62
P04224 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
P04224 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.2□□□□□ -0.62
P04224 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
P04224 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
P04224 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
P04224 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.2□□□□□ -0.62
P04224 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
P04224 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.2□□□□□ -0.62
P04224 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.2□□□□□ -0.62
P04224 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.2□□□□□ -0.62
P04224 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms