Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vti1aO89116 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.79□□□□□ -0.2
Vti1aO89116 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.78□□□□□ -0.2
Vti1aO89116 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vti1aO89116 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vti1aO89116 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Vti1aO89116 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.78□□□□□ -0.2
Vti1aO89116 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.78□□□□□ -0.2
Vti1aO89116 Gm37042-201ENSMUST00000193816 581 ntBASIC13.78□□□□□ -0.2
Vti1aO89116 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Vti1aO89116 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.78□□□□□ -0.2
Vti1aO89116 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.78□□□□□ -0.2
Vti1aO89116 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Vti1aO89116 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.78□□□□□ -0.2
Vti1aO89116 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vti1aO89116 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Vti1aO89116 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.78□□□□□ -0.2
Vti1aO89116 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1aO89116 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Vti1aO89116 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vti1aO89116 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vti1aO89116 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Vti1aO89116 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.77□□□□□ -0.2
Vti1aO89116 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.2
Vti1aO89116 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vti1aO89116 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.77□□□□□ -0.2
Vti1aO89116 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vti1aO89116 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.77□□□□□ -0.21
Vti1aO89116 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.77□□□□□ -0.21
Vti1aO89116 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vti1aO89116 Gm2383-201ENSMUST00000181461 807 ntBASIC13.77□□□□□ -0.21
Vti1aO89116 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.77□□□□□ -0.21
Vti1aO89116 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.77□□□□□ -0.21
Vti1aO89116 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.77□□□□□ -0.21
Vti1aO89116 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Gm21769-201ENSMUST00000211922 111 ntBASIC13.77□□□□□ -0.21
Vti1aO89116 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vti1aO89116 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.77□□□□□ -0.21
Vti1aO89116 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.77□□□□□ -0.21
Vti1aO89116 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.77□□□□□ -0.21
Vti1aO89116 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.77□□□□□ -0.21
Vti1aO89116 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vti1aO89116 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vti1aO89116 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vti1aO89116 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1aO89116 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vti1aO89116 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vti1aO89116 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.76□□□□□ -0.21
Vti1aO89116 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.76□□□□□ -0.21
Vti1aO89116 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms