Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.13□□□□□ -0.31
Syn1O88935 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.13□□□□□ -0.31
Syn1O88935 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.13□□□□□ -0.31
Syn1O88935 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Syn1O88935 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Gm10076-201ENSMUST00000073238 384 ntBASIC13.13□□□□□ -0.31
Syn1O88935 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.13□□□□□ -0.31
Syn1O88935 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.13□□□□□ -0.31
Syn1O88935 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Syn1O88935 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Syn1O88935 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Syn1O88935 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.12□□□□□ -0.31
Syn1O88935 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Gm23949-201ENSMUST00000104027 127 ntBASIC13.12□□□□□ -0.31
Syn1O88935 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.12□□□□□ -0.31
Syn1O88935 Gm28071-201ENSMUST00000190355 478 ntBASIC13.12□□□□□ -0.31
Syn1O88935 Gm37905-201ENSMUST00000195310 341 ntBASIC13.12□□□□□ -0.31
Syn1O88935 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Syn1O88935 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Syn1O88935 Gm45598-202ENSMUST00000210719 986 ntBASIC13.12□□□□□ -0.31
Syn1O88935 Gm1821-202ENSMUST00000227415 750 ntBASIC13.12□□□□□ -0.31
Syn1O88935 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.12□□□□□ -0.31
Syn1O88935 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Syn1O88935 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.12□□□□□ -0.31
Syn1O88935 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.12□□□□□ -0.31
Syn1O88935 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Syn1O88935 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syn1O88935 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Syn1O88935 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Syn1O88935 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Syn1O88935 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Syn1O88935 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.11□□□□□ -0.31
Syn1O88935 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Syn1O88935 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Syn1O88935 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Gm34023-201ENSMUST00000195539 217 ntBASIC13.11□□□□□ -0.31
Syn1O88935 Gm45550-201ENSMUST00000209380 946 ntBASIC13.11□□□□□ -0.31
Syn1O88935 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Syn1O88935 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms