Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
CcnkO88874 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
CcnkO88874 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.39□□□□□ -0.59
CcnkO88874 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
CcnkO88874 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
CcnkO88874 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.39□□□□□ -0.59
CcnkO88874 Gm11524-201ENSMUST00000119349 807 ntBASIC11.39□□□□□ -0.59
CcnkO88874 Gm12485-201ENSMUST00000119641 291 ntBASIC11.39□□□□□ -0.59
CcnkO88874 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.39□□□□□ -0.59
CcnkO88874 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.39□□□□□ -0.59
CcnkO88874 Gm5354-201ENSMUST00000182417 973 ntBASIC11.39□□□□□ -0.59
CcnkO88874 Gm38144-201ENSMUST00000192790 465 ntBASIC11.39□□□□□ -0.59
CcnkO88874 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.39□□□□□ -0.59
CcnkO88874 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.39□□□□□ -0.59
CcnkO88874 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.39□□□□□ -0.59
CcnkO88874 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.39□□□□□ -0.59
CcnkO88874 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
CcnkO88874 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CcnkO88874 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.39□□□□□ -0.59
CcnkO88874 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
CcnkO88874 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcnkO88874 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CcnkO88874 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CcnkO88874 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CcnkO88874 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CcnkO88874 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CcnkO88874 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.38□□□□□ -0.59
CcnkO88874 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.38□□□□□ -0.59
CcnkO88874 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CcnkO88874 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CcnkO88874 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.38□□□□□ -0.59
CcnkO88874 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.38□□□□□ -0.59
CcnkO88874 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.38□□□□□ -0.59
CcnkO88874 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CcnkO88874 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
CcnkO88874 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.38□□□□□ -0.59
CcnkO88874 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CcnkO88874 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcnkO88874 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.37□□□□□ -0.59
CcnkO88874 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CcnkO88874 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.37□□□□□ -0.59
CcnkO88874 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms