Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Pdlim1O70400 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Pdlim1O70400 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pdlim1O70400 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.63□□□□□ -0.39
Pdlim1O70400 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.63□□□□□ -0.39
Pdlim1O70400 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pdlim1O70400 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.63□□□□□ -0.39
Pdlim1O70400 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.63□□□□□ -0.39
Pdlim1O70400 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.63□□□□□ -0.39
Pdlim1O70400 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.63□□□□□ -0.39
Pdlim1O70400 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pdlim1O70400 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pdlim1O70400 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Pdlim1O70400 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Gm22018-201ENSMUST00000104357 131 ntBASIC12.62□□□□□ -0.39
Pdlim1O70400 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Gm12502-201ENSMUST00000120197 444 ntBASIC12.62□□□□□ -0.39
Pdlim1O70400 Gm15703-201ENSMUST00000120250 880 ntBASIC12.62□□□□□ -0.39
Pdlim1O70400 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Gm8738-201ENSMUST00000172606 329 ntBASIC12.62□□□□□ -0.39
Pdlim1O70400 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Gm45930-201ENSMUST00000221330 292 ntBASIC12.62□□□□□ -0.39
Pdlim1O70400 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
Pdlim1O70400 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.62□□□□□ -0.39
Pdlim1O70400 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.62□□□□□ -0.39
Pdlim1O70400 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdlim1O70400 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pdlim1O70400 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pdlim1O70400 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.61□□□□□ -0.39
Pdlim1O70400 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.61□□□□□ -0.39
Pdlim1O70400 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pdlim1O70400 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.61□□□□□ -0.39
Pdlim1O70400 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms