Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rnf13O54965 Gm44124-201ENSMUST00000204159 472 ntBASIC11.56□□□□□ -0.56
Rnf13O54965 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.56□□□□□ -0.56
Rnf13O54965 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.56□□□□□ -0.56
Rnf13O54965 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rnf13O54965 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf13O54965 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Rnf13O54965 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf13O54965 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rnf13O54965 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rnf13O54965 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf13O54965 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.55□□□□□ -0.56
Rnf13O54965 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rnf13O54965 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rnf13O54965 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Rnf13O54965 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.55□□□□□ -0.56
Rnf13O54965 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rnf13O54965 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Gm15371-201ENSMUST00000117057 784 ntBASIC11.55□□□□□ -0.56
Rnf13O54965 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Rnf13O54965 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Gm42612-201ENSMUST00000197986 623 ntBASIC11.55□□□□□ -0.56
Rnf13O54965 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.55□□□□□ -0.56
Rnf13O54965 Gm43170-201ENSMUST00000199827 612 ntBASIC11.55□□□□□ -0.56
Rnf13O54965 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rnf13O54965 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.55□□□□□ -0.56
Rnf13O54965 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.55□□□□□ -0.56
Rnf13O54965 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.55□□□□□ -0.56
Rnf13O54965 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.55□□□□□ -0.56
Rnf13O54965 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Rnf13O54965 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf13O54965 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.54□□□□□ -0.56
Rnf13O54965 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.54□□□□□ -0.56
Rnf13O54965 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rnf13O54965 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Rnf13O54965 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rnf13O54965 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.54□□□□□ -0.56
Rnf13O54965 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.54□□□□□ -0.56
Rnf13O54965 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Gm22189-201ENSMUST00000103822 86 ntBASIC11.54□□□□□ -0.56
Rnf13O54965 Gm13813-201ENSMUST00000120998 787 ntBASIC11.54□□□□□ -0.56
Rnf13O54965 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rnf13O54965 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.54□□□□□ -0.56
Rnf13O54965 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.54□□□□□ -0.56
Rnf13O54965 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms