Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.14■□□□□ 0.01
Smarce1O54941 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.14■□□□□ 0.01
Smarce1O54941 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smarce1O54941 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarce1O54941 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.14■□□□□ 0.01
Smarce1O54941 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC15.14■□□□□ 0.01
Smarce1O54941 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarce1O54941 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smarce1O54941 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smarce1O54941 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smarce1O54941 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Smarce1O54941 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarce1O54941 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarce1O54941 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarce1O54941 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarce1O54941 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarce1O54941 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Smarce1O54941 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smarce1O54941 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smarce1O54941 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarce1O54941 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarce1O54941 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarce1O54941 Gm45743-201ENSMUST00000212701 2795 ntBASIC15.13■□□□□ 0.01
Smarce1O54941 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarce1O54941 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.12■□□□□ 0.01
Smarce1O54941 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.12■□□□□ 0.01
Smarce1O54941 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Smarce1O54941 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.12■□□□□ 0.01
Smarce1O54941 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.12■□□□□ 0.01
Smarce1O54941 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Mir6977-201ENSMUST00000184960 64 ntBASIC15.12■□□□□ 0.01
Smarce1O54941 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarce1O54941 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.12■□□□□ 0.01
Smarce1O54941 Gm38671-201ENSMUST00000200573 130 ntBASIC15.12■□□□□ 0.01
Smarce1O54941 Gm8463-201ENSMUST00000208573 613 ntBASIC15.12■□□□□ 0.01
Smarce1O54941 Gm45668-201ENSMUST00000211271 493 ntBASIC15.12■□□□□ 0.01
Smarce1O54941 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.12■□□□□ 0.01
Smarce1O54941 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smarce1O54941 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarce1O54941 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smarce1O54941 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Smarce1O54941 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarce1O54941 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarce1O54941 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
Smarce1O54941 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarce1O54941 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.11■□□□□ 0.01
Smarce1O54941 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarce1O54941 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms