Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Limk2O54785 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
Limk2O54785 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.96□□□□□ -0.34
Limk2O54785 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Limk2O54785 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Limk2O54785 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.96□□□□□ -0.34
Limk2O54785 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limk2O54785 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.95□□□□□ -0.34
Limk2O54785 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.95□□□□□ -0.34
Limk2O54785 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.95□□□□□ -0.34
Limk2O54785 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.95□□□□□ -0.34
Limk2O54785 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.95□□□□□ -0.34
Limk2O54785 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.95□□□□□ -0.34
Limk2O54785 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.95□□□□□ -0.34
Limk2O54785 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.95□□□□□ -0.34
Limk2O54785 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Limk2O54785 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Limk2O54785 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Limk2O54785 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.95□□□□□ -0.34
Limk2O54785 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.95□□□□□ -0.34
Limk2O54785 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Limk2O54785 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.95□□□□□ -0.34
Limk2O54785 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.95□□□□□ -0.34
Limk2O54785 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.95□□□□□ -0.34
Limk2O54785 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Limk2O54785 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.94□□□□□ -0.34
Limk2O54785 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Limk2O54785 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.94□□□□□ -0.34
Limk2O54785 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.94□□□□□ -0.34
Limk2O54785 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Limk2O54785 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Limk2O54785 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Limk2O54785 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Limk2O54785 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Limk2O54785 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Limk2O54785 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Limk2O54785 Gm6023-201ENSMUST00000118217 606 ntBASIC12.94□□□□□ -0.34
Limk2O54785 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.94□□□□□ -0.34
Limk2O54785 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.94□□□□□ -0.34
Limk2O54785 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.94□□□□□ -0.34
Limk2O54785 Gm26461-201ENSMUST00000175064 290 ntBASIC12.94□□□□□ -0.34
Limk2O54785 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.94□□□□□ -0.34
Limk2O54785 Gm37259-201ENSMUST00000193903 849 ntBASIC12.94□□□□□ -0.34
Limk2O54785 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.94□□□□□ -0.34
Limk2O54785 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.94□□□□□ -0.34
Limk2O54785 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.94□□□□□ -0.34
Limk2O54785 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.94□□□□□ -0.34
Limk2O54785 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Limk2O54785 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Limk2O54785 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms