Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Gm9387-201ENSMUST00000098624 1320 ntBASIC19.25■□□□□ 0.67
Polr1aO35134 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr1aO35134 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr1aO35134 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr1aO35134 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Polr1aO35134 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.24■□□□□ 0.67
Polr1aO35134 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Polr1aO35134 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr1aO35134 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr1aO35134 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC19.24■□□□□ 0.67
Polr1aO35134 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Polr1aO35134 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr1aO35134 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Polr1aO35134 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC19.24■□□□□ 0.67
Polr1aO35134 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr1aO35134 Gm45643-201ENSMUST00000211364 1484 ntBASIC19.24■□□□□ 0.67
Polr1aO35134 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Polr1aO35134 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Polr1aO35134 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC19.23■□□□□ 0.67
Polr1aO35134 Gm18636-201ENSMUST00000218846 1066 ntBASIC19.23■□□□□ 0.67
Polr1aO35134 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC19.23■□□□□ 0.67
Polr1aO35134 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Polr1aO35134 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr1aO35134 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC19.22■□□□□ 0.67
Polr1aO35134 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Mir7076-201ENSMUST00000183519 74 ntBASIC19.22■□□□□ 0.67
Polr1aO35134 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Gm37905-201ENSMUST00000195310 341 ntBASIC19.22■□□□□ 0.67
Polr1aO35134 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC19.22■□□□□ 0.67
Polr1aO35134 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Polr1aO35134 Gm9129-201ENSMUST00000218173 1689 ntBASIC19.22■□□□□ 0.67
Polr1aO35134 AC154671.1-201ENSMUST00000228617 1578 ntBASIC19.22■□□□□ 0.67
Polr1aO35134 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Polr1aO35134 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Polr1aO35134 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC19.22■□□□□ 0.67
Polr1aO35134 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Polr1aO35134 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Polr1aO35134 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC19.22■□□□□ 0.67
Polr1aO35134 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr1aO35134 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Polr1aO35134 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Polr1aO35134 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Polr1aO35134 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Gm18782-201ENSMUST00000209023 1399 ntBASIC19.21■□□□□ 0.67
Polr1aO35134 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 AC154262.2-202ENSMUST00000225158 1331 ntBASIC19.21■□□□□ 0.67
Polr1aO35134 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC19.21■□□□□ 0.67
Polr1aO35134 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC19.21■□□□□ 0.67
Polr1aO35134 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC19.21■□□□□ 0.67
Polr1aO35134 AC171241.1-201ENSMUST00000228144 1166 ntBASIC19.21■□□□□ 0.67
Polr1aO35134 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr1aO35134 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC19.2■□□□□ 0.66
Polr1aO35134 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC19.2■□□□□ 0.66
Polr1aO35134 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Polr1aO35134 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Polr1aO35134 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC19.2■□□□□ 0.66
Polr1aO35134 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC19.2■□□□□ 0.66
Polr1aO35134 Gm6485-201ENSMUST00000160676 439 ntBASIC19.2■□□□□ 0.66
Polr1aO35134 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Polr1aO35134 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms