Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc180J3QNE4 Gm18304-201ENSMUST00000189162 546 ntBASIC22.89■■□□□ 1.25
Ccdc180J3QNE4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Ccdc180J3QNE4 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc180J3QNE4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc180J3QNE4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc180J3QNE4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc180J3QNE4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc180J3QNE4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Gm21998-201ENSMUST00000117552 1308 ntBASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Gm45605-201ENSMUST00000210265 4269 ntBASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Gm8566-201ENSMUST00000120174 465 ntBASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Gm10752-201ENSMUST00000218348 729 ntBASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Gm4797-201ENSMUST00000219075 1283 ntBASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Ptprs-211ENSMUST00000223859 5588 ntBASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc180J3QNE4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Gm23596-201ENSMUST00000104304 132 ntBASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 AC166992.1-201ENSMUST00000216356 565 ntBASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 AC135469.1-201ENSMUST00000225984 772 ntBASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Ginm1-202ENSMUST00000065124 300 ntBASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Gm6210-201ENSMUST00000204734 1942 ntBASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Gm13461-201ENSMUST00000120980 662 ntBASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Gm28071-201ENSMUST00000190355 478 ntBASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc180J3QNE4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Gm27438-201ENSMUST00000183480 110 ntBASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Gm45550-201ENSMUST00000209380 946 ntBASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Gm807-202ENSMUST00000224929 408 ntBASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc180J3QNE4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC22.85■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms