Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Gm28719-201ENSMUST00000187779 1757 ntBASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Gm12948-201ENSMUST00000119406 682 ntBASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf11E9PZM7 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Gm9072-201ENSMUST00000218390 1514 ntBASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 AC151275.1-201ENSMUST00000224870 585 ntBASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Gm25201-201ENSMUST00000083093 170 ntBASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf11E9PZM7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Gm7278-201ENSMUST00000119836 1401 ntBASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Gm12857-201ENSMUST00000117678 592 ntBASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Gm42779-201ENSMUST00000198807 406 ntBASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Gm43610-201ENSMUST00000199117 365 ntBASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Mt1-202ENSMUST00000211807 1085 ntBASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf11E9PZM7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf11E9PZM7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf11E9PZM7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms