Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm28833-201ENSMUST00000189671 559 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm43726-201ENSMUST00000199110 775 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm23612-201ENSMUST00000103823 110 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm11996-201ENSMUST00000117538 915 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm12072-201ENSMUST00000118293 715 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm23576-201ENSMUST00000179918 110 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm29548-201ENSMUST00000187012 694 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm28105-201ENSMUST00000187788 694 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 BC080696-201ENSMUST00000202858 1218 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gm5395-201ENSMUST00000121650 915 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm15136-201ENSMUST00000120552 533 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm14006-201ENSMUST00000122132 981 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm8268-201ENSMUST00000209683 458 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm39288-201ENSMUST00000210554 446 ntBASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.36□□□□□ -0.43
Col6a3E9PWQ3 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm16441-201ENSMUST00000138176 924 ntBASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms