Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Gm11511-201ENSMUST00000118146 540 ntBASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Gm16071-201ENSMUST00000119589 793 ntBASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Gm13263-201ENSMUST00000121271 838 ntBASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Mir1956-201ENSMUST00000157748 65 ntBASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Gm17826-201ENSMUST00000189720 798 ntBASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Gm37299-201ENSMUST00000193951 826 ntBASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hfm1D3Z4R1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Gm5638-201ENSMUST00000118618 1258 ntBASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Gm15352-201ENSMUST00000118696 270 ntBASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Rprl1-201ENSMUST00000158050 327 ntBASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Prrxl1-205ENSMUST00000228878 723 ntBASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Gm43721-201ENSMUST00000199677 2313 ntBASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Hfm1D3Z4R1 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Gm11956-201ENSMUST00000119525 512 ntBASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hfm1D3Z4R1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hfm1D3Z4R1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hfm1D3Z4R1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hfm1D3Z4R1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Hfm1D3Z4R1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hfm1D3Z4R1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Gm25951-201ENSMUST00000175330 64 ntBASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Gm6771-201ENSMUST00000182716 1001 ntBASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Hfm1D3Z4R1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms