Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Gm13392-201ENSMUST00000117708 150 ntBASIC11.58□□□□□ -0.56
Gm3543D3Z235 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.58□□□□□ -0.56
Gm3543D3Z235 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Gm27514-201ENSMUST00000183692 110 ntBASIC11.58□□□□□ -0.56
Gm3543D3Z235 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.58□□□□□ -0.56
Gm3543D3Z235 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.58□□□□□ -0.56
Gm3543D3Z235 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 BC043934-202ENSMUST00000185694 2356 ntBASIC11.58□□□□□ -0.56
Gm3543D3Z235 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.58□□□□□ -0.56
Gm3543D3Z235 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3543D3Z235 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.57□□□□□ -0.56
Gm3543D3Z235 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Gm5187-201ENSMUST00000117317 991 ntBASIC11.57□□□□□ -0.56
Gm3543D3Z235 Gm8805-201ENSMUST00000117848 313 ntBASIC11.57□□□□□ -0.56
Gm3543D3Z235 Gm11637-201ENSMUST00000120601 592 ntBASIC11.57□□□□□ -0.56
Gm3543D3Z235 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.57□□□□□ -0.56
Gm3543D3Z235 Gm13123-201ENSMUST00000122173 492 ntBASIC11.57□□□□□ -0.56
Gm3543D3Z235 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Gm42693-201ENSMUST00000196779 631 ntBASIC11.57□□□□□ -0.56
Gm3543D3Z235 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3543D3Z235 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.56□□□□□ -0.56
Gm3543D3Z235 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3543D3Z235 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms