Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.43□□□□□ -0.58
Shank1D3YZU1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Gm43058-201ENSMUST00000197645 625 ntBASIC11.43□□□□□ -0.58
Shank1D3YZU1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Gm5369-201ENSMUST00000217499 588 ntBASIC11.43□□□□□ -0.58
Shank1D3YZU1 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.43□□□□□ -0.58
Shank1D3YZU1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.43□□□□□ -0.58
Shank1D3YZU1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.42□□□□□ -0.58
Shank1D3YZU1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.42□□□□□ -0.58
Shank1D3YZU1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Gm13611-201ENSMUST00000118269 318 ntBASIC11.42□□□□□ -0.58
Shank1D3YZU1 Gm12134-201ENSMUST00000122109 520 ntBASIC11.42□□□□□ -0.58
Shank1D3YZU1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.42□□□□□ -0.58
Shank1D3YZU1 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.42□□□□□ -0.58
Shank1D3YZU1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.42□□□□□ -0.58
Shank1D3YZU1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.42□□□□□ -0.58
Shank1D3YZU1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shank1D3YZU1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Gm24845-201ENSMUST00000158034 109 ntBASIC11.41□□□□□ -0.58
Shank1D3YZU1 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.41□□□□□ -0.58
Shank1D3YZU1 Gzmn-202ENSMUST00000225535 989 ntBASIC11.41□□□□□ -0.58
Shank1D3YZU1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms