Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Gm13392-201ENSMUST00000117708 150 ntBASIC12.44□□□□□ -0.42
Clip3B9EHT4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.44□□□□□ -0.42
Clip3B9EHT4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clip3B9EHT4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.43□□□□□ -0.42
Clip3B9EHT4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Mir686-201ENSMUST00000102174 109 ntBASIC12.43□□□□□ -0.42
Clip3B9EHT4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Gm27682-201ENSMUST00000183930 110 ntBASIC12.43□□□□□ -0.42
Clip3B9EHT4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.43□□□□□ -0.42
Clip3B9EHT4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Gm45880-201ENSMUST00000213041 853 ntBASIC12.43□□□□□ -0.42
Clip3B9EHT4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.43□□□□□ -0.42
Clip3B9EHT4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clip3B9EHT4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms