Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Gm25144-201ENSMUST00000179561 110 ntBASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Gm25352-201ENSMUST00000179815 110 ntBASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Map1b-203ENSMUST00000223725 2669 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Gm15693-201ENSMUST00000120470 637 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Gm27390-201ENSMUST00000184516 176 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Gm7063-201ENSMUST00000186840 981 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Gm44344-201ENSMUST00000200287 129 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Gm12887B1AVM1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms