Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm26232-201ENSMUST00000083360 166 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm24136-201ENSMUST00000083374 165 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm26110-201ENSMUST00000083971 165 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.48□□□□□ -0.41
Chd3B1AR17 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.48□□□□□ -0.41
Chd3B1AR17 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Chd3B1AR17 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chd3B1AR17 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chd3B1AR17 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Chd3B1AR17 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.48□□□□□ -0.41
Chd3B1AR17 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.48□□□□□ -0.41
Chd3B1AR17 Gm45186-201ENSMUST00000206874 478 ntBASIC12.48□□□□□ -0.41
Chd3B1AR17 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.48□□□□□ -0.41
Chd3B1AR17 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.48□□□□□ -0.41
Chd3B1AR17 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.48□□□□□ -0.41
Chd3B1AR17 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.48□□□□□ -0.41
Chd3B1AR17 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd3B1AR17 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Gm38317-201ENSMUST00000195564 343 ntBASIC12.47□□□□□ -0.41
Chd3B1AR17 Gm18753-201ENSMUST00000201000 566 ntBASIC12.47□□□□□ -0.41
Chd3B1AR17 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Gm14921-201ENSMUST00000118643 908 ntBASIC12.47□□□□□ -0.41
Chd3B1AR17 Gm15276-201ENSMUST00000145953 498 ntBASIC12.47□□□□□ -0.41
Chd3B1AR17 Gm6963-201ENSMUST00000147879 379 ntBASIC12.47□□□□□ -0.41
Chd3B1AR17 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd3B1AR17 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Chd3B1AR17 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Chd3B1AR17 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.46□□□□□ -0.41
Chd3B1AR17 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.46□□□□□ -0.41
Chd3B1AR17 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Chd3B1AR17 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Chd3B1AR17 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Chd3B1AR17 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Mir877-201ENSMUST00000104738 85 ntBASIC12.46□□□□□ -0.41
Chd3B1AR17 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.46□□□□□ -0.41
Chd3B1AR17 Gm13570-201ENSMUST00000140763 309 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms