Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm28911-201ENSMUST00000188837 117 ntBASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Gm12091-201ENSMUST00000146791 830 ntBASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc194A0A140LIT1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Gm8463-201ENSMUST00000208573 613 ntBASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ccdc194A0A140LIT1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms