Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm38158-201ENSMUST00000194617 339 ntBASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm37008-201ENSMUST00000195712 319 ntBASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm18062-201ENSMUST00000208020 547 ntBASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm18055-201ENSMUST00000208254 547 ntBASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm19309-201ENSMUST00000218295 205 ntBASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm22058-201ENSMUST00000083393 310 ntBASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm24231-201ENSMUST00000104315 133 ntBASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm13492-201ENSMUST00000119772 665 ntBASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm5370-201ENSMUST00000187187 574 ntBASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atg4a-psA0A0G2JFS9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm11597-201ENSMUST00000121423 964 ntBASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm13316-201ENSMUST00000140537 691 ntBASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm5781-201ENSMUST00000219792 443 ntBASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm8018-201ENSMUST00000173536 789 ntBASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms