Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdh20Q9Z0M3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Gm4271-201ENSMUST00000174444 973 ntBASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Gm22121-201ENSMUST00000175148 54 ntBASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Gm8099-201ENSMUST00000200510 742 ntBASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Gm6091-201ENSMUST00000098307 165 ntBASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh20Q9Z0M3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Gm23363-201ENSMUST00000175024 79 ntBASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh20Q9Z0M3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms