Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm27046-201ENSMUST00000182160 463 ntBASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm38317-201ENSMUST00000195564 343 ntBASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm18056-201ENSMUST00000207670 568 ntBASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm18061-201ENSMUST00000208350 562 ntBASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm18063-201ENSMUST00000208529 568 ntBASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm18052-201ENSMUST00000208750 559 ntBASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcb1Q9Z0H3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gm14109-201ENSMUST00000118814 309 ntBASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gm29199-201ENSMUST00000187766 775 ntBASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms