Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Gm26315-201ENSMUST00000083890 321 ntBASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Gm4875-201ENSMUST00000118257 786 ntBASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Gm11524-201ENSMUST00000119349 807 ntBASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Gm11978-201ENSMUST00000122315 466 ntBASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Gm27525-201ENSMUST00000184465 107 ntBASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn5Q9JL35 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgn5Q9JL35 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgn5Q9JL35 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Gm4995-201ENSMUST00000117247 432 ntBASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Gm42550-201ENSMUST00000201553 960 ntBASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.33□□□□□ -0.12
Hmgn5Q9JL35 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Gm19078-201ENSMUST00000206311 727 ntBASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms