Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nkx2-4Q9EQM3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-4Q9EQM3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Nkx2-4Q9EQM3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-4Q9EQM3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Gm9358-201ENSMUST00000183067 927 ntBASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-4Q9EQM3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gm7851-201ENSMUST00000117574 323 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gm25881-201ENSMUST00000157783 103 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gm18038-201ENSMUST00000197900 485 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gm19931-201ENSMUST00000198920 368 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gm9132-201ENSMUST00000210182 832 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Ginm1-202ENSMUST00000065124 300 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.05□□□□□ -0.32
Nkx2-4Q9EQM3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms