Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Gm18061-201ENSMUST00000208350 562 ntBASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Gm18063-201ENSMUST00000208529 568 ntBASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Gm18052-201ENSMUST00000208750 559 ntBASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Gm6082-201ENSMUST00000215204 454 ntBASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rsph3bQ9DA80 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Rubie-203ENSMUST00000227803 2430 ntBASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Gm13492-201ENSMUST00000119772 665 ntBASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rsph3bQ9DA80 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.02□□□□□ -0.16
Rsph3bQ9DA80 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Gm25668-201ENSMUST00000157700 129 ntBASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Gm30285-201ENSMUST00000214614 422 ntBASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Gm22058-201ENSMUST00000083393 310 ntBASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rsph3bQ9DA80 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms