Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Gm18733-201ENSMUST00000173950 856 ntBASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Gm46209-201ENSMUST00000217912 553 ntBASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3a3Q9D554 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sf3a3Q9D554 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Sf3a3Q9D554 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Sf3a3Q9D554 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Sf3a3Q9D554 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sf3a3Q9D554 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms