Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt2Q9CZN7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Shmt2Q9CZN7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt2Q9CZN7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt2Q9CZN7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt2Q9CZN7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.22□□□□□ -0.45
Shmt2Q9CZN7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt2Q9CZN7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt2Q9CZN7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt2Q9CZN7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt2Q9CZN7 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm4984-201ENSMUST00000115987 360 ntBASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm8213-201ENSMUST00000118191 441 ntBASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm18187-201ENSMUST00000196476 984 ntBASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shmt2Q9CZN7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Daam2-202ENSMUST00000224595 1926 ntBASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shmt2Q9CZN7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Gm8602-201ENSMUST00000184045 607 ntBASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms