Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nip7Q9CXK8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nip7Q9CXK8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Gm12266-201ENSMUST00000120311 962 ntBASIC15.84■□□□□ 0.13
Nip7Q9CXK8 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.84■□□□□ 0.13
Nip7Q9CXK8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Gm19187-201ENSMUST00000206781 892 ntBASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nip7Q9CXK8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nip7Q9CXK8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Nip7Q9CXK8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Nip7Q9CXK8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nip7Q9CXK8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nip7Q9CXK8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nip7Q9CXK8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nip7Q9CXK8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nip7Q9CXK8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Gm14644-201ENSMUST00000116671 647 ntBASIC15.83■□□□□ 0.12
Nip7Q9CXK8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nip7Q9CXK8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Mir1943-201ENSMUST00000158276 73 ntBASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nip7Q9CXK8 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.81■□□□□ 0.12
Nip7Q9CXK8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nip7Q9CXK8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nip7Q9CXK8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Nip7Q9CXK8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.81■□□□□ 0.12
Nip7Q9CXK8 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms