Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Mir686-201ENSMUST00000102174 109 ntBASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Mir449b-201ENSMUST00000104833 80 ntBASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Gm13813-201ENSMUST00000120998 787 ntBASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Gm15376-201ENSMUST00000122258 783 ntBASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Gm43094-201ENSMUST00000196549 921 ntBASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.12□□□□□ -0.31
Ddx47Q9CWX9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Gm14701-201ENSMUST00000117156 348 ntBASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Gm26464-201ENSMUST00000157094 305 ntBASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Gm27680-201ENSMUST00000184192 160 ntBASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ddx47Q9CWX9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx47Q9CWX9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms