Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Gm22331-201ENSMUST00000158066 136 ntBASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Gm27847-201ENSMUST00000183711 107 ntBASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Gm27375-201ENSMUST00000183799 107 ntBASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Gm7063-201ENSMUST00000186840 981 ntBASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Khdc3Q9CWU5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Gm37497-201ENSMUST00000195830 798 ntBASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms