Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Gm5687-201ENSMUST00000118252 640 ntBASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Gm19184-201ENSMUST00000196798 928 ntBASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.31□□□□□ -0.12
Smc1aQ9CU62 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1aQ9CU62 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Gm15770-201ENSMUST00000117498 584 ntBASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Gm12203-201ENSMUST00000118235 598 ntBASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Gm12209-201ENSMUST00000120089 596 ntBASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1aQ9CU62 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Gm1335-201ENSMUST00000121653 386 ntBASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Gm4271-201ENSMUST00000174444 973 ntBASIC14.29□□□□□ -0.12
Smc1aQ9CU62 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1aQ9CU62 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms