Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.56□□□□□ -0.88
Chchd1Q9CQA6 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Thap2-203ENSMUST00000218989 527 ntBASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chchd1Q9CQA6 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms